FALDO: a semantic standard for describing the location of nucleotide and protein feature annotation

Year: 2016

Venue: Journal of Biomedical Semantics

Authors: Jerven T. Bolleman, Christopher J. Mungall, Francesco Strozzi, Joachim Baran, Michel Dumontier, Raoul P. J. Bonnal, Robert Buels, Robert Hoehndorf, Takatomo Fujisawa, Toshiaki Katayama, Peter A. J. Cock

DOI: 10.1186/s13326-016-0067-z

Abstract

Nucleotide and protein sequence feature annotations are essential to understand biology on the genomic, transcriptomic, and proteomic level. Using Semantic Web technologies to query biological annotations, there was no standard that described this potentially complex location information as subject-predicate-object triples.